STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_0184PFAM: O-antigen polymerase; KEGG: msu:MS0243 RfaL protein. (435 aa)    
Predicted Functional Partners:
Ajs_2022
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.918
Ajs_0185
PFAM: glycosyl transferase, group 1; KEGG: sth:STH1101 glycosyl transferase.
  
  
 0.842
Ajs_0186
PFAM: glycosyl transferase, family 2; KEGG: sma:SAV5093 glycosyl transferase.
  
  
 0.832
Ajs_0187
KEGG: mmr:Mmar10_2764 hypothetical protein.
       0.819
Ajs_0183
KEGG: rfr:Rfer_0507 hypothetical protein.
 
     0.723
ilvE
Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.689
Ajs_2324
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0453 methyltransferase type 12.
  
     0.654
Ajs_3012
PFAM: lipopolysaccharide biosynthesis; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein.
  
  
 0.579
Ajs_3034
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rme:Rmet_2726 sugar transferase.
  
  
 0.547
Ajs_4052
KEGG: pol:Bpro_0388 putative lipoprotein transmembrane.
  
     0.515
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.