Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ajs_1463 | Ajs_1464 | KEGG: pol:Bpro_3489 hypothetical protein. | KEGG: ppu:PP_5391 hypothetical protein. | 0.550 |
Ajs_1463 | Ajs_1465 | KEGG: pol:Bpro_3489 hypothetical protein. | KEGG: ppu:PP_5390 hypothetical protein. | 0.490 |
Ajs_1463 | Ajs_1466 | KEGG: pol:Bpro_3489 hypothetical protein. | PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ppu:PP_5389 hypothetical protein. | 0.486 |
Ajs_1463 | Ajs_1467 | KEGG: pol:Bpro_3489 hypothetical protein. | PFAM: Heavy metal transport/detoxification protein; KEGG: mmc:Mmcs_3947 heavy metal transport/detoxification protein. | 0.403 |
Ajs_1464 | Ajs_1463 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: pol:Bpro_3489 hypothetical protein. | 0.550 |
Ajs_1464 | Ajs_1465 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: ppu:PP_5390 hypothetical protein. | 0.907 |
Ajs_1464 | Ajs_1466 | KEGG: ppu:PP_5391 hypothetical protein. | PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ppu:PP_5389 hypothetical protein. | 0.859 |
Ajs_1464 | Ajs_1467 | KEGG: ppu:PP_5391 hypothetical protein. | PFAM: Heavy metal transport/detoxification protein; KEGG: mmc:Mmcs_3947 heavy metal transport/detoxification protein. | 0.612 |
Ajs_1464 | Ajs_1468 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: ana:asl7591 hypothetical protein. | 0.807 |
Ajs_1464 | Ajs_1469 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: rfr:Rfer_0418 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | 0.487 |
Ajs_1464 | Ajs_1470 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: lpp:lpp2348 hypothetical protein. | 0.461 |
Ajs_1464 | Ajs_1491 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: ana:asl7591 hypothetical protein. | 0.517 |
Ajs_1464 | Ajs_2711 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: ana:asl7591 hypothetical protein. | 0.707 |
Ajs_1464 | Ajs_2714 | KEGG: ppu:PP_5391 hypothetical protein. | KEGG: pol:Bpro_1175 hypothetical protein. | 0.663 |
Ajs_1465 | Ajs_1463 | KEGG: ppu:PP_5390 hypothetical protein. | KEGG: pol:Bpro_3489 hypothetical protein. | 0.490 |
Ajs_1465 | Ajs_1464 | KEGG: ppu:PP_5390 hypothetical protein. | KEGG: ppu:PP_5391 hypothetical protein. | 0.907 |
Ajs_1465 | Ajs_1466 | KEGG: ppu:PP_5390 hypothetical protein. | PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ppu:PP_5389 hypothetical protein. | 0.948 |
Ajs_1465 | Ajs_1467 | KEGG: ppu:PP_5390 hypothetical protein. | PFAM: Heavy metal transport/detoxification protein; KEGG: mmc:Mmcs_3947 heavy metal transport/detoxification protein. | 0.618 |
Ajs_1465 | Ajs_1468 | KEGG: ppu:PP_5390 hypothetical protein. | KEGG: ana:asl7591 hypothetical protein. | 0.487 |
Ajs_1465 | Ajs_1469 | KEGG: ppu:PP_5390 hypothetical protein. | KEGG: rfr:Rfer_0418 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein. | 0.479 |
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