STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_2188KEGG: eba:ebA2408 hypothetical protein. (477 aa)    
Predicted Functional Partners:
Ajs_2186
KEGG: eba:ebA2406 hypothetical protein.
 
     0.949
Ajs_2187
KEGG: eba:ebA2407 hypothetical protein.
 
     0.949
Ajs_2189
KEGG: eba:ebA2409 hypothetical protein.
 
     0.949
Ajs_2190
KEGG: eba:ebA2410 hypothetical protein.
 
     0.949
Ajs_2192
KEGG: eba:ebB70 hypothetical protein.
 
     0.945
Ajs_2194
KEGG: eba:ebA2412 hypothetical protein.
 
     0.932
Ajs_2185
KEGG: eba:ebA2405 hypothetical protein.
 
    0.930
Ajs_2181
KEGG: eba:ebA2510 hypothetical protein.
 
     0.837
Ajs_2182
PFAM: protein of unknown function DUF1527; KEGG: eba:ebA2511 hypothetical protein.
 
     0.837
Ajs_2179
KEGG: eba:ebA2395 hypothetical protein.
 
     0.835
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.