STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_2711KEGG: ana:asl7591 hypothetical protein. (86 aa)    
Predicted Functional Partners:
Ajs_2710
KEGG: rfr:Rfer_0418 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
       0.788
Ajs_2709
KEGG: lpp:lpp2348 hypothetical protein.
 
     0.786
Ajs_1491
KEGG: ana:asl7591 hypothetical protein.
  
     0.763
Ajs_2713
KEGG: rfr:Rfer_0419 hypothetical protein.
 
    0.754
Ajs_1466
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ppu:PP_5389 hypothetical protein.
 
    0.751
Ajs_1464
KEGG: ppu:PP_5391 hypothetical protein.
 
     0.707
Ajs_2708
Hypothetical protein; KEGG: eba:ebA3243 transposase, IS5 family.
 
     0.566
Ajs_2726
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
     0.564
Ajs_1460
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
     0.562
Ajs_1234
PFAM: copper resistance B precursor; KEGG: rso:RSp0657 probable copper resistance protein B.
 
     0.542
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.