STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tamTrans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate. (258 aa)    
Predicted Functional Partners:
Ajs_2789
PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3597 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.842
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.772
Ajs_2788
KEGG: pol:Bpro_3596 hypothetical protein.
       0.620
Ajs_2792
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: pol:Bpro_3599 transcriptional regulator, GntR family.
       0.550
Ajs_2787
Aconitase; PFAM: aconitate hydratase domain protein; aconitate hydratase 2; KEGG: rso:RSp0332 probable aconitate hydratase 2 transmembrane protein; Belongs to the aconitase/IPM isomerase family.
       0.441
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.