STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1420Adenylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: tel:tll2410 adenylate cyclase. (316 aa)    
Predicted Functional Partners:
Acid_4904
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: lic:LIC11198 adenylate/guanylate cyclase.
 
 
 0.983
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.916
Acid_5307
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: sru:SRU_1173 2-oxoglutarate dehydrogenase, E1 component.
   
 
 0.914
Acid_1195
TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: aba:Acid345_2026 adenylate cyclase.
     
 0.913
Acid_5001
PFAM: pyruvate kinase; KEGG: tfu:Tfu_1179 pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.907
Acid_1096
PFAM: metallophosphoesterase; KEGG: aba:Acid345_4689 metallophosphoesterase.
    
 0.905
Acid_5668
PFAM: metallophosphoesterase; KEGG: rso:RS02211 hypothetical protein.
    
 0.905
Acid_2404
PFAM: metallophosphoesterase; KEGG: rba:RB5841 probable beta-galactosidase.
    
 0.904
Acid_1285
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.903
ribB
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.833
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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