Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_1787 | Acid_1788 | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | KEGG: aba:Acid345_0350 hypothetical protein. | 0.565 |
Acid_1787 | Acid_1789 | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | 0.430 |
Acid_1787 | Acid_1790 | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | 0.438 |
Acid_1788 | Acid_1787 | KEGG: aba:Acid345_0350 hypothetical protein. | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | 0.565 |
Acid_1788 | Acid_1789 | KEGG: aba:Acid345_0350 hypothetical protein. | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | 0.536 |
Acid_1788 | Acid_1790 | KEGG: aba:Acid345_0350 hypothetical protein. | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | 0.519 |
Acid_1789 | Acid_1787 | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | 0.430 |
Acid_1789 | Acid_1788 | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | KEGG: aba:Acid345_0350 hypothetical protein. | 0.536 |
Acid_1789 | Acid_1790 | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | 0.746 |
Acid_1789 | Acid_1791 | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | KEGG: ava:Ava_0969 putative amino acid transporter. | 0.400 |
Acid_1790 | Acid_1787 | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | PFAM: PGAP1 family protein; KEGG: aba:Acid345_0349 hypothetical protein. | 0.438 |
Acid_1790 | Acid_1788 | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | KEGG: aba:Acid345_0350 hypothetical protein. | 0.519 |
Acid_1790 | Acid_1789 | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | 0.746 |
Acid_1790 | Acid_1791 | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | KEGG: ava:Ava_0969 putative amino acid transporter. | 0.424 |
Acid_1791 | Acid_1789 | KEGG: ava:Ava_0969 putative amino acid transporter. | PFAM: PHA accumulation regulator DNA-binding protein; KEGG: aba:Acid345_0351 PHA accumulation regulator DNA-binding-like. | 0.400 |
Acid_1791 | Acid_1790 | KEGG: ava:Ava_0969 putative amino acid transporter. | PFAM: ABC-1 domain protein; KEGG: aba:Acid345_0359 unusual protein kinase. | 0.424 |