STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2684Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator. (975 aa)    
Predicted Functional Partners:
Acid_2683
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; KEGG: ana:alr2138 two-component response regulator.
 
 
 0.892
Acid_2188
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: gvi:gll1683 two-component response regulator.
 
 
 0.790
Acid_2119
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; PAS fold-3 domain protein; KEGG: xcv:XCV1985 putative sensor protein.
 
 
0.782
Acid_2536
Transcriptional regulator, LuxR family; KEGG: ana:all2239 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: regulatory protein, LuxR; Bacterio-opsin activator, HTH domain protein; Sigma-70, region 4 type 2; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.777
Acid_7865
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: bpm:BURPS1710b_A0126 sensory box histidine kinase/response regulator.
  
 
   0.748
Acid_1406
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: aba:Acid345_3502 two component transcriptional regulator, LuxR family.
 
 
 0.744
Acid_5086
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sco:SCO2308 two-component system response regulator.
 
 
 0.740
Acid_1272
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dge:Dgeo_0183 two component transcriptional regulator, LuxR family.
 
 
 0.739
Acid_2870
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: dsy:DSY4618 hypothetical protein.
 
 
 0.739
Acid_3481
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: aba:Acid345_1691 two component transcriptional regulator, LuxR family.
 
 
 0.735
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.