STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3069PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_3245 putative esterase. (388 aa)    
Predicted Functional Partners:
Acid_3070
PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor.
       0.773
Acid_3071
PFAM: cytochrome c, class I; KEGG: tbd:Tbd_2545 putative cytochrome c.
       0.773
Acid_2681
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase, family 10; KEGG: sde:Sde_2633 endo-1,4-beta-xylanase.
   0.623
Acid_2664
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rba:RB4014 probable acetyl xylan esterase.
  
     0.621
Acid_3068
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_1859 putative esterase.
 
    
0.579
Acid_3934
PFAM: putative esterase; KEGG: pfu:PF1108 putative alpha-dextrin endo-1,6-alpha-glucosidase.
 
  
 0.574
Acid_2993
PFAM: glycoside hydrolase, family 43; KEGG: bfs:BF0575 putative glycosyl hydrolase/xylanase.
  
   
 0.473
Acid_3067
PFAM: amidohydrolase 2.
       0.455
Acid_2648
PFAM: putative esterase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rba:RB9732 probable gluconolactonase precursor-hypothetical secreted or membrane associated protein.
  
     0.454
Acid_0829
PFAM: putative esterase; KEGG: bxe:Bxe_B2109 putative esterase.
  
     0.445
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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