STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4314PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rba:RB1532 probable serine/threonine-protein kinase PknA. (431 aa)    
Predicted Functional Partners:
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
 
   0.954
Acid_4310
PFAM: Forkhead-associated protein; cyclic nucleotide-binding; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rba:RB12994 putative oxidoreductase, Fe-S subunit.
  
 
 0.813
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
  
   0.806
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
  
   0.806
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
  
   0.806
Acid_4312
KEGG: nar:Saro_0299 hypothetical protein.
   
   0.799
Acid_4243
SMART: serine/threonine protein kinase; KEGG: aba:Acid345_4118 serine/threonine protein kinase.
  
     0.775
Acid_4311
KEGG: nar:Saro_0300 hypothetical protein.
       0.773
Acid_4315
KEGG: nar:Saro_2377 hypothetical protein.
       0.773
Acid_4316
KEGG: nar:Saro_2375 hypothetical protein.
       0.773
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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