STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4431PFAM: protein kinase; WD40 domain protein beta Propeller; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aba:Acid345_4391 serine/threonine protein kinase. (877 aa)    
Predicted Functional Partners:
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
 
   0.808
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
   0.807
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
   0.806
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
 
   0.804
Acid_4430
PFAM: TPR repeat-containing protein; polysaccharide deacetylase; peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_0287 polysaccharide deacetylase.
  
  
 0.717
Acid_4429
Hypothetical protein.
       0.653
Acid_4432
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2407 putative ABC-transporter membrane-spanning ATP-binding component.
  
    0.567
Acid_4428
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_3291 enoyl-CoA hydratase/isomerase.
       0.506
Acid_4433
Hypothetical protein.
       0.488
Acid_6080
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gka:GK2866 hypothetical protein.
  
   0.443
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.