STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5165PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU0573 alcohol dehydrogenase, zinc-containing. (326 aa)    
Predicted Functional Partners:
Acid_1558
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: ana:all4458 probable dehydrogenase.
 
 0.967
Acid_7928
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lxx:Lxx22610 alcohol dehydrogenase.
  
  
 
0.921
Acid_5088
PFAM: aldehyde dehydrogenase; KEGG: noc:Noc_1710 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.909
Acid_6729
PFAM: aldehyde dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.909
Acid_3896
PFAM: iron-containing alcohol dehydrogenase; KEGG: ppr:PBPRA2418 putative iron-containing alcohol dehydrogenase.
  
 
 0.779
Acid_5167
PFAM: flavin reductase domain protein, FMN-binding; KEGG: ttj:TTHB244 phenol hydroxylase component B.
     
 0.737
Acid_5166
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
       0.732
Acid_3304
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr6532 putative dehydrogenase.
 
 
 0.572
Acid_5168
PFAM: histone family protein DNA-binding protein; KEGG: aba:Acid345_1185 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family.
       0.536
Acid_4539
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: gme:Gmet_1637 phosphate acetyltransferase.
  
  
 0.513
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.