STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5676PFAM: protein kinase; protein of unknown function DUF323; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aba:Acid345_2578 serine/threonine protein kinase. (947 aa)    
Predicted Functional Partners:
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
 
 0.841
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
 
 0.840
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
 
 
 0.840
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
 
 
 0.840
Acid_5675
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aba:Acid345_2766 Fe-S protein, radical SAM family.
  
    0.597
Acid_5677
Hypothetical protein.
  
   0.537
Acid_1303
Adenylate/guanylate cyclase; PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sme:SMa1591 putative adenylate cyclase.
 
  
0.501
Acid_7020
PFAM: protein kinase; WD40 domain protein beta Propeller; SMART: tyrosine protein kinase; WD-40 repeat protein; serine/threonine protein kinase; KEGG: aba:Acid345_4390 serine/threonine protein kinase.
 
   
0.494
Acid_5674
Hypothetical protein.
       0.468
Acid_2466
PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: aba:Acid345_1052 serine/threonine protein kinase with TPR repeats.
 
  
0.452
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.