STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7642PFAM: phage integrase family protein; KEGG: eba:p2A228 putative integrase. (314 aa)    
Predicted Functional Partners:
Acid_7641
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: eba:p2A227 putative integrase; Belongs to the 'phage' integrase family.
 
     0.946
Acid_7643
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mlo:mll6044 integrase/recombinase.
    
0.850
Acid_2520
PFAM: phage integrase family protein; KEGG: eba:p2A229 putative integrase; Belongs to the 'phage' integrase family.
     0.785
Acid_0632
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: eba:p2A227 putative integrase; Belongs to the 'phage' integrase family.
  
     0.775
Acid_2522
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mlo:mll9329 integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.775
Acid_3312
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: eba:p2A227 putative integrase; Belongs to the 'phage' integrase family.
  
     0.775
Acid_6799
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mlo:mll6228 integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.775
Acid_2943
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mlo:mll9329 integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
Acid_2945
PFAM: phage integrase family protein; KEGG: mlo:mll9331 integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.774
Acid_0633
PFAM: phage integrase family protein; KEGG: mlo:mll9331 integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.773
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.