STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK0640Hypothetical conserved protein; Belongs to the UPF0342 family. (119 aa)    
Predicted Functional Partners:
GK1304
Hypothetical conserved protein; Belongs to the UPF0342 family.
  
 
 
 0.816
GK0246
Hypothetical conserved protein.
  
    0.653
GK2825
Hypothetical conserved protein.
  
     0.650
GK2695
Hypothetical conserved protein.
  
     0.629
GK1334
Hypothetical conserved protein.
  
    0.623
GK0639
Hypothetical conserved protein.
       0.619
GK0824
Hypothetical conserved protein; Belongs to the UPF0413 family.
  
     0.612
GK2786
Hypothetical conserved protein.
  
     0.604
lipL
Hypothetical conserved protein; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.
  
    0.571
GK0468
Hypothetical conserved protein; Belongs to the UPF0374 family.
  
    0.570
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.