Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GK0758 | GK0766 | Nitric oxide reductase cytochrome b subunit. | Nitrate/nitrite transporter. | 0.406 |
GK0758 | GK0767 | Nitric oxide reductase cytochrome b subunit. | Nitrite reductase. | 0.967 |
GK0758 | GK1828 | Nitric oxide reductase cytochrome b subunit. | Nitrate reductase gamma subunit. | 0.529 |
GK0758 | GK2480 | Nitric oxide reductase cytochrome b subunit. | Cytochrome c. | 0.900 |
GK0766 | GK0758 | Nitrate/nitrite transporter. | Nitric oxide reductase cytochrome b subunit. | 0.406 |
GK0766 | GK0767 | Nitrate/nitrite transporter. | Nitrite reductase. | 0.959 |
GK0766 | GK1828 | Nitrate/nitrite transporter. | Nitrate reductase gamma subunit. | 0.990 |
GK0766 | GK1865 | Nitrate/nitrite transporter. | Nitrate/nitrite transporter. | 0.917 |
GK0766 | GK1866 | Nitrate/nitrite transporter. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.958 |
GK0766 | GK1867 | Nitrate/nitrite transporter. | Assimilatory nitrite reductase subunit. | 0.946 |
GK0766 | GK1868 | Nitrate/nitrite transporter. | Assimilatory nitrite reductase subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.963 |
GK0766 | GK1872 | Nitrate/nitrite transporter. | Oxidoreductase. | 0.907 |
GK0767 | GK0758 | Nitrite reductase. | Nitric oxide reductase cytochrome b subunit. | 0.967 |
GK0767 | GK0766 | Nitrite reductase. | Nitrate/nitrite transporter. | 0.959 |
GK0767 | GK0892 | Nitrite reductase. | Hypothetical protein. | 0.764 |
GK0767 | GK1828 | Nitrite reductase. | Nitrate reductase gamma subunit. | 0.936 |
GK0767 | GK1865 | Nitrite reductase. | Nitrate/nitrite transporter. | 0.922 |
GK0767 | GK1866 | Nitrite reductase. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.900 |
GK0767 | GK1867 | Nitrite reductase. | Assimilatory nitrite reductase subunit. | 0.901 |
GK0767 | GK1868 | Nitrite reductase. | Assimilatory nitrite reductase subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.912 |
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