STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK0767Nitrite reductase. (354 aa)    
Predicted Functional Partners:
GK0758
Nitric oxide reductase cytochrome b subunit.
 
  
 0.967
GK0766
Nitrate/nitrite transporter.
 
  
 0.959
GK1828
Nitrate reductase gamma subunit.
 
  
 0.936
GK1865
Nitrate/nitrite transporter.
 
  
 0.922
GK1868
Assimilatory nitrite reductase subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.912
GK1867
Assimilatory nitrite reductase subunit.
     
 0.901
GK1866
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
GK1872
Oxidoreductase.
     
  0.900
GK2480
Cytochrome c.
  
  
 0.778
GK0892
Hypothetical protein.
 
  
 0.764
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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