STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK1176Serine/threonine protein kinase. (656 aa)    
Predicted Functional Partners:
GK1175
Serine/threonine phosphatase.
 
 0.995
rsgA
Hypothetical conserved protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.943
GK0015
Hypothetical conserved protein.
  
 
 0.901
GK0875
Hypothetical protein; Similar to C-terminal region of hypothetical protein (TTE0033 467 aa) of Thermoanaerobacter tengcongensis (GK0874 and GK0875 are divided by frame shift).
  
 
 0.901
GK1016
Hypothetical conserved protein.
  
 
 0.901
GK1720
Hypothetical conserved protein.
  
 
 0.901
GK2451
Hypothetical conserved protein.
  
 
 0.901
GK3431
Hypothetical conserved protein.
  
 
 0.901
rlmN
Hypothetical conserved protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.871
GK1173
RNA-binding Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.870
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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