STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcBMalate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (727 aa)    
Predicted Functional Partners:
GK0676
Isocitrate lyase.
 
 
 0.996
GK2736
Citrate synthaseII; Belongs to the citrate synthase family.
   
 0.972
GK3415
Phosphotransacetylase.
 
 
 0.972
GK1532
Glycolate oxidase subunit.
 
 
 0.964
GK1531
Glycolate oxidase iron-sulfur subunit.
  
 
 0.959
GK1534
Malate dehydrogenase (malic enzyme).
  
 
 0.953
GK2759
acetyl-CoA synthetase (acetate-CoA ligase).
   
 0.951
GK2793
acetate-CoA ligase.
   
 0.951
GK2806
acetyl-CoA synthetase.
   
 0.951
GK1530
Glycolate oxidase subunit.
  
 
 0.947
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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