Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK0676 | GK1530 | GK0676 | GK1530 | Isocitrate lyase. | Glycolate oxidase subunit. | 0.908 |
GK0676 | GK1531 | GK0676 | GK1531 | Isocitrate lyase. | Glycolate oxidase iron-sulfur subunit. | 0.908 |
GK0676 | GK1532 | GK0676 | GK1532 | Isocitrate lyase. | Glycolate oxidase subunit. | 0.908 |
GK0676 | GK2736 | GK0676 | GK2736 | Isocitrate lyase. | Citrate synthaseII; Belongs to the citrate synthase family. | 0.471 |
GK0676 | GK3415 | GK0676 | GK3415 | Isocitrate lyase. | Phosphotransacetylase. | 0.693 |
GK0676 | glcB | GK0676 | GK1533 | Isocitrate lyase. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.996 |
GK1530 | GK0676 | GK1530 | GK0676 | Glycolate oxidase subunit. | Isocitrate lyase. | 0.908 |
GK1530 | GK1531 | GK1530 | GK1531 | Glycolate oxidase subunit. | Glycolate oxidase iron-sulfur subunit. | 0.991 |
GK1530 | GK1532 | GK1530 | GK1532 | Glycolate oxidase subunit. | Glycolate oxidase subunit. | 0.960 |
GK1530 | glcB | GK1530 | GK1533 | Glycolate oxidase subunit. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.947 |
GK1531 | GK0676 | GK1531 | GK0676 | Glycolate oxidase iron-sulfur subunit. | Isocitrate lyase. | 0.908 |
GK1531 | GK1530 | GK1531 | GK1530 | Glycolate oxidase iron-sulfur subunit. | Glycolate oxidase subunit. | 0.991 |
GK1531 | GK1532 | GK1531 | GK1532 | Glycolate oxidase iron-sulfur subunit. | Glycolate oxidase subunit. | 0.998 |
GK1531 | glcB | GK1531 | GK1533 | Glycolate oxidase iron-sulfur subunit. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.959 |
GK1532 | GK0676 | GK1532 | GK0676 | Glycolate oxidase subunit. | Isocitrate lyase. | 0.908 |
GK1532 | GK1530 | GK1532 | GK1530 | Glycolate oxidase subunit. | Glycolate oxidase subunit. | 0.960 |
GK1532 | GK1531 | GK1532 | GK1531 | Glycolate oxidase subunit. | Glycolate oxidase iron-sulfur subunit. | 0.998 |
GK1532 | GK1534 | GK1532 | GK1534 | Glycolate oxidase subunit. | Malate dehydrogenase (malic enzyme). | 0.404 |
GK1532 | glcB | GK1532 | GK1533 | Glycolate oxidase subunit. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.964 |
GK1534 | GK1532 | GK1534 | GK1532 | Malate dehydrogenase (malic enzyme). | Glycolate oxidase subunit. | 0.404 |
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