Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK1897 | GK1898 | GK1897 | GK1898 | Oxidoreductase. | Myo-inositol 2-dehydrogenase. | 0.705 |
GK1897 | GK1899 | GK1897 | GK1899 | Oxidoreductase. | Oxidoreductase. | 0.968 |
GK1897 | iolA | GK1897 | GK1887 | Oxidoreductase. | Methylmalonate-semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively. | 0.444 |
GK1897 | iolA1 | GK1897 | GK1426 | Oxidoreductase. | Aldehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively. | 0.418 |
GK1897 | iolB | GK1897 | GK1889 | Oxidoreductase. | Myo-inositol catabolism protein; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate). | 0.915 |
GK1897 | iolC | GK1897 | GK1888 | Oxidoreductase. | Myo-inositol catabolism protein; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.886 |
GK1897 | iolD | GK1897 | GK1891 | Oxidoreductase. | Myo-inositol catabolism protein (thiamine pyrophosphate-requiring enzymes); Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.918 |
GK1897 | iolE | GK1897 | GK1890 | Oxidoreductase. | Myo-inositol catabolism protein; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol). | 0.991 |
GK1897 | iolI | GK1897 | GK1892 | Oxidoreductase. | Myo-inositol catabolism protein. | 0.979 |
GK1898 | GK1897 | GK1898 | GK1897 | Myo-inositol 2-dehydrogenase. | Oxidoreductase. | 0.705 |
GK1898 | GK1899 | GK1898 | GK1899 | Myo-inositol 2-dehydrogenase. | Oxidoreductase. | 0.809 |
GK1898 | iolB | GK1898 | GK1889 | Myo-inositol 2-dehydrogenase. | Myo-inositol catabolism protein; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate). | 0.821 |
GK1898 | iolC | GK1898 | GK1888 | Myo-inositol 2-dehydrogenase. | Myo-inositol catabolism protein; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.741 |
GK1898 | iolD | GK1898 | GK1891 | Myo-inositol 2-dehydrogenase. | Myo-inositol catabolism protein (thiamine pyrophosphate-requiring enzymes); Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.797 |
GK1898 | iolE | GK1898 | GK1890 | Myo-inositol 2-dehydrogenase. | Myo-inositol catabolism protein; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol). | 0.942 |
GK1898 | iolI | GK1898 | GK1892 | Myo-inositol 2-dehydrogenase. | Myo-inositol catabolism protein. | 0.703 |
GK1899 | GK1897 | GK1899 | GK1897 | Oxidoreductase. | Oxidoreductase. | 0.968 |
GK1899 | GK1898 | GK1899 | GK1898 | Oxidoreductase. | Myo-inositol 2-dehydrogenase. | 0.809 |
GK1899 | iolB | GK1899 | GK1889 | Oxidoreductase. | Myo-inositol catabolism protein; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate). | 0.851 |
GK1899 | iolC | GK1899 | GK1888 | Oxidoreductase. | Myo-inositol catabolism protein; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.810 |
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