STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK1894Sugar ABC transporter (ATP-binding protein); Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family. (503 aa)    
Predicted Functional Partners:
GK1893
Sugar ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 0.997
GK1896
Sugar ABC transporter (sugar-binding protein).
 0.988
GK3227
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.934
GK0946
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.885
GK3226
Ribose ABC transporter (ribose-binding protein).
 
 0.833
GK1879
D-xylose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
  
 0.770
iolI
Myo-inositol catabolism protein.
 
    0.750
GK3210
Sugar ABC transporter (sugar-binding protein).
 
 0.742
GK1899
Oxidoreductase.
  
  
 0.732
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.712
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.