STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK1896Sugar ABC transporter (sugar-binding protein). (318 aa)    
Predicted Functional Partners:
GK1893
Sugar ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 0.992
GK1894
Sugar ABC transporter (ATP-binding protein); Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.
 0.988
GK1468
Hypothetical conserved protein.
 
 
 0.962
GK3227
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.931
GK0946
Ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.905
rbsA
Ribose ABC transporter (ATP-binding protein); Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.896
rbsD
Ribose ABC transporter (permease); Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.885
xylG
D-xylose ABC transporter (ATP binding protein); Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.872
GK0947
Ribose ABC transporter (ATP-binding protein).
 
 
 0.869
araG
ABC transporter (ATP-binding protein).
 
 0.807
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.