Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK1178 | GK1957 | GK1178 | GK1957 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 2-keto-3-deoxy-gluconate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.866 |
GK1178 | GK2344 | GK1178 | GK2344 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.945 |
GK1178 | GK3371 | GK1178 | GK3371 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribose 5-phosphate isomerase. | 0.953 |
GK1178 | araB | GK1178 | GK1905 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | L-ribulokinase. | 0.917 |
GK1178 | araD | GK1178 | GK1906 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | L-ribulose-5-phosphate 4-epimerase (phosphoribulose isomerase). | 0.919 |
GK1901 | araA | GK1901 | GK1904 | Transcriptional regulator involved in degradation (LacI family). | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.717 |
GK1901 | araB | GK1901 | GK1905 | Transcriptional regulator involved in degradation (LacI family). | L-ribulokinase. | 0.706 |
GK1957 | GK1178 | GK1957 | GK1178 | 2-keto-3-deoxy-gluconate kinase; Belongs to the carbohydrate kinase PfkB family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.866 |
GK1957 | araB | GK1957 | GK1905 | 2-keto-3-deoxy-gluconate kinase; Belongs to the carbohydrate kinase PfkB family. | L-ribulokinase. | 0.817 |
GK2147 | araA | GK2147 | GK1904 | Transcriptional regulator. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.664 |
GK2147 | araB | GK2147 | GK1905 | Transcriptional regulator. | L-ribulokinase. | 0.653 |
GK2344 | GK1178 | GK2344 | GK1178 | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.945 |
GK2344 | GK3371 | GK2344 | GK3371 | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Ribose 5-phosphate isomerase. | 0.927 |
GK2344 | araB | GK2344 | GK1905 | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | L-ribulokinase. | 0.800 |
GK2810 | araA | GK2810 | GK1904 | Transcriptional regulator involved in carbon catabolite control. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.664 |
GK2810 | araB | GK2810 | GK1905 | Transcriptional regulator involved in carbon catabolite control. | L-ribulokinase. | 0.653 |
GK3371 | GK1178 | GK3371 | GK1178 | Ribose 5-phosphate isomerase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.953 |
GK3371 | GK2344 | GK3371 | GK2344 | Ribose 5-phosphate isomerase. | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.927 |
GK3371 | araB | GK3371 | GK1905 | Ribose 5-phosphate isomerase. | L-ribulokinase. | 0.810 |
araA | GK1901 | GK1904 | GK1901 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Transcriptional regulator involved in degradation (LacI family). | 0.717 |
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