Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GK2229 | GK2230 | GK2229 | GK2230 | Hypothetical conserved protein. | Sporulation protein. | 0.677 |
| GK2229 | GK2231 | GK2229 | GK2231 | Hypothetical conserved protein. | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | 0.575 |
| GK2229 | GK2233 | GK2229 | GK2233 | Hypothetical conserved protein. | L-asparaginase (L-asparagine amidohydrolase). | 0.409 |
| GK2229 | prsW | GK2229 | GK2232 | Hypothetical conserved protein. | Hypothetical conserved protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity). | 0.414 |
| GK2230 | GK2229 | GK2230 | GK2229 | Sporulation protein. | Hypothetical conserved protein. | 0.677 |
| GK2230 | GK2231 | GK2230 | GK2231 | Sporulation protein. | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | 0.952 |
| GK2230 | GK2233 | GK2230 | GK2233 | Sporulation protein. | L-asparaginase (L-asparagine amidohydrolase). | 0.568 |
| GK2230 | GK2238 | GK2230 | GK2238 | Sporulation protein. | Spore coat peptide assembly protein. | 0.408 |
| GK2230 | prsW | GK2230 | GK2232 | Sporulation protein. | Hypothetical conserved protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity). | 0.569 |
| GK2231 | GK2229 | GK2231 | GK2229 | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | Hypothetical conserved protein. | 0.575 |
| GK2231 | GK2230 | GK2231 | GK2230 | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | Sporulation protein. | 0.952 |
| GK2231 | GK2233 | GK2231 | GK2233 | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | L-asparaginase (L-asparagine amidohydrolase). | 0.581 |
| GK2231 | prsW | GK2231 | GK2232 | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | Hypothetical conserved protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity). | 0.637 |
| GK2233 | GK2229 | GK2233 | GK2229 | L-asparaginase (L-asparagine amidohydrolase). | Hypothetical conserved protein. | 0.409 |
| GK2233 | GK2230 | GK2233 | GK2230 | L-asparaginase (L-asparagine amidohydrolase). | Sporulation protein. | 0.568 |
| GK2233 | GK2231 | GK2233 | GK2231 | L-asparaginase (L-asparagine amidohydrolase). | Sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme). | 0.581 |
| GK2233 | GK2234 | GK2233 | GK2234 | L-asparaginase (L-asparagine amidohydrolase). | Thioredoxin reductase. | 0.502 |
| GK2233 | prsW | GK2233 | GK2232 | L-asparaginase (L-asparagine amidohydrolase). | Hypothetical conserved protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity). | 0.800 |
| GK2234 | GK2233 | GK2234 | GK2233 | Thioredoxin reductase. | L-asparaginase (L-asparagine amidohydrolase). | 0.502 |
| GK2234 | prsW | GK2234 | GK2232 | Thioredoxin reductase. | Hypothetical conserved protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity). | 0.502 |
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