STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM51218.1Agmatine deiminase; Belongs to the agmatine deiminase family. (337 aa)    
Predicted Functional Partners:
SEK48009.1
N-carbamoylputrescine amidase.
 
 0.973
SEL37167.1
Agmatinase; Belongs to the arginase family.
     
 0.797
SEL88243.1
Agmatinase; Belongs to the arginase family.
     
 0.797
SEM51112.1
Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily.
       0.646
SEM51138.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
       0.646
SEM51197.1
Peptide/nickel transport system substrate-binding protein.
       0.646
SEM51161.1
Peptide/nickel transport system permease protein.
       0.638
SEL37185.1
Predicted amidohydrolase.
 
 0.635
SEM51175.1
Peptide/nickel transport system permease protein.
       0.618
SEM51255.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
    
0.540
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.