STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaO19.3817C2H2-type domain-containing protein. (239 aa)    
Predicted Functional Partners:
UGP1
UTP--glucose-1-phosphate uridylyltransferase; Plays a central role as a glucosyl donor in cellular metabolic pathways; Belongs to the UDPGP type 1 family.
 
      0.840
CaO19.1045
U2 snRNP complex subunit.
   
   0.789
CaO19.4724
U1-type domain-containing protein.
    
 
 0.769
CaO19.3178
SF3a splicing factor complex subunit.
    
 
 0.753
RSE1
Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control.
    
   0.752
CaO19.2675
mRNA-binding U2 snRNP complex subunit.
    
   0.752
CaO19.2066
Protein-lysine N-methyltransferase.
    
 0.727
FGR16
U4/U6-U5 snRNP complex subunit.
   
   0.631
CWC26
Pre-mRNA-splicing factor CWC26; Involved in pre-mRNA splicing.
   
   0.631
SNU114
U5 snRNP GTPase.
    
   0.602
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.