STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL59361.1ABC transporter permease. (380 aa)    
Predicted Functional Partners:
AIL59360.1
ABC transporter ATP-binding protein.
 
 0.998
AIL59359.1
Mammalian cell entry related domain protein.
 
 0.997
AIL63426.1
Toluene tolerance ABC efflux transporter ATP-binding protein Ttg2A.
 
 0.980
mlaD
Toluene tolerance ABC transporter periplasmic substrate-binding protein Ttg2C.
 
 0.978
AIL59358.1
ABC transporter auxiliary component-like protein.
 
  
 0.948
mlaE
Toluene tolerance ABC efflux transporter permease Ttg2B.
  
  
 
0.920
AIL63422.1
Toluene tolerance protein Ttg2E.
  
 0.863
AIL63423.1
Toluene tolerance protein Ttg2D.
  
 
 0.858
AIL59362.1
Hypothetical protein.
       0.670
AIL60891.1
Anti-sigma-factor antagonist.
   
   0.612
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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