STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_10298Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
UMAG_11043
Small nuclear ribonucleoprotein Sm D3.
   
  0.944
UMAG_03738
Chromosome 10, whole genome shotgun sequence.
    
 0.943
UMAG_02281
Putative pre-mRNA splicing factor prp1.
    
 0.942
UMAG_02868
Chromosome 7, whole genome shotgun sequence.
    
 0.936
UMAG_10805
Small nuclear ribonucleoprotein G.
   
 0.926
UMAG_12130
Putative Small nuclear ribonucleoprotein F.
   
  0.924
UMAG_10666
Chromosome 10, whole genome shotgun sequence; Belongs to the DEAD box helicase family.
    
 0.887
UMAG_00364
Chromosome 1, whole genome shotgun sequence.
    
 0.886
UMAG_05159
U1-type domain-containing protein.
    
 0.885
UMAG_10738
Chromosome 16, whole genome shotgun sequence.
    
 0.884
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.