STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB00805.1Peptidoglycan endopeptidase LytE. (358 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.889
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.865
SFA96245.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.834
SFA69313.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.831
SFB10200.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.828
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.824
SFA90134.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
 
  
0.726
SFA83666.1
Chemotaxis protein MotB.
  
 
 0.668
SFB11195.1
LPXTG-motif cell wall anchor domain-containing protein.
  
 
 0.668
SFA74632.1
Cell wall-associated hydrolase, NlpC family.
 
  
0.607
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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