STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_1646Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535. (333 aa)    
Predicted Functional Partners:
ACP_0835
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
  
     0.764
ACP_0830
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
  
     0.741
ACP_1645
Hypothetical protein; Identified by glimmer; putative.
       0.584
ACP_0742
Putative galactosyl transferase CpsE; Identified by similarity to SP:Q04664; match to protein family HMM PF02397; match to protein family HMM TIGR03025.
 
  
 0.496
mnmA
(5-methylaminomethyl-2-thiouridylate)- methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
    0.487
ACP_1866
bplG protein; Identified by similarity to GB:CAE40465.1; match to protein family HMM PF02397.
 
  
 0.478
ACP_0755
Chain length determinant family protein; Identified by match to protein family HMM PF02706.
 
  
 0.400
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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