STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00459Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
CC1G_10823
Mitochondrial ribosomal protein subunit S2.
   
 
 0.972
CC1G_03610
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.968
CC1G_07167
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.966
CC1G_01773
Uncharacterized protein.
   
 
 0.956
CC1G_00197
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.948
CC1G_05321
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.945
CC1G_10274
Uncharacterized protein.
   
 
 0.942
CC1G_08999
Uncharacterized protein.
   
 
 0.942
CC1G_00935
Uncharacterized protein.
   
 
 0.940
CC1G_05190
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.939
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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