STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11437Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (320 aa)    
Predicted Functional Partners:
CC1G_12434
RNase_PH domain-containing protein.
    
   0.874
CC1G_00440
cAMP-dependent protein kinase regulatory subunit.
   
 0.847
CC1G_15504
Clathrin assembly protein AP47; Belongs to the adaptor complexes medium subunit family.
    
 
 0.825
CC1G_05387
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.819
CC1G_03919
Crm1-F1.
   
 
 0.741
CC1G_09006
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.738
CC1G_08202
Ribitol kinase.
  
 0.738
CC1G_07046
Endopeptidase; Belongs to the AAA ATPase family.
  
 0.705
CC1G_05504
Endopeptidase; Belongs to the AAA ATPase family.
  
 0.705
CC1G_11095
ATPase with bromodomain-containing protein.
  
 0.705
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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