STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10757ATP-dependent permease. (1073 aa)    
Predicted Functional Partners:
CC1G_01082
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.635
CC1G_09000
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.610
CC1G_09510
ATP synthase subunit gamma.
   
   0.559
CC1G_01993
mRNA export factor elf1.
    
 
 0.429
CC1G_09897
ATP synthase.
   
   0.412
CC1G_01938
Uncharacterized protein.
   
   0.409
CC1G_01940
ATP-synthase delta-subunit.
   
   0.409
CC1G_00079
Vacuolar membrane protein.
  
 
 0.409
CC1G_00134
Electron transfer protein 1.
    
 0.401
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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