Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0120 | Ava_3650 | Ava_0120 | Ava_3650 | Dihydroorotase multifunctional complex type. | Dihydroorotase. | 0.924 |
Ava_0120 | carA | Ava_0120 | Ava_4410 | Dihydroorotase multifunctional complex type. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.985 |
Ava_0120 | carB | Ava_0120 | Ava_1893 | Dihydroorotase multifunctional complex type. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.984 |
Ava_0120 | pyrB | Ava_0120 | Ava_1174 | Dihydroorotase multifunctional complex type. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Ava_0120 | pyrE | Ava_0120 | Ava_0957 | Dihydroorotase multifunctional complex type. | Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.956 |
Ava_0120 | pyrE-2 | Ava_0120 | Ava_2358 | Dihydroorotase multifunctional complex type. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.834 |
Ava_0120 | pyrF | Ava_0120 | Ava_0924 | Dihydroorotase multifunctional complex type. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.810 |
Ava_0120 | pyrR | Ava_0120 | Ava_3128 | Dihydroorotase multifunctional complex type. | Phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.891 |
Ava_2127 | purA | Ava_2127 | Ava_2053 | Aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.910 |
Ava_2127 | pyrB | Ava_2127 | Ava_1174 | Aminotransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.915 |
Ava_3650 | Ava_0120 | Ava_3650 | Ava_0120 | Dihydroorotase. | Dihydroorotase multifunctional complex type. | 0.924 |
Ava_3650 | carA | Ava_3650 | Ava_4410 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.982 |
Ava_3650 | carB | Ava_3650 | Ava_1893 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.980 |
Ava_3650 | pyrB | Ava_3650 | Ava_1174 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Ava_3650 | pyrE | Ava_3650 | Ava_0957 | Dihydroorotase. | Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.956 |
Ava_3650 | pyrE-2 | Ava_3650 | Ava_2358 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.810 |
Ava_3650 | pyrF | Ava_3650 | Ava_0924 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.839 |
Ava_3650 | pyrR | Ava_3650 | Ava_3128 | Dihydroorotase. | Phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.955 |
carA | Ava_0120 | Ava_4410 | Ava_0120 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase multifunctional complex type. | 0.985 |
carA | Ava_3650 | Ava_4410 | Ava_3650 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.982 |
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