Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0636 | Ava_1785 | Ava_0636 | Ava_1785 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | 0.900 |
Ava_0636 | Ava_2127 | Ava_0636 | Ava_2127 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aminotransferase. | 0.818 |
Ava_0636 | argG | Ava_0636 | Ava_2068 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.918 |
Ava_0636 | purA | Ava_0636 | Ava_2053 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.921 |
Ava_1785 | Ava_0636 | Ava_1785 | Ava_0636 | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
Ava_1785 | Ava_2127 | Ava_1785 | Ava_2127 | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | Aminotransferase. | 0.900 |
Ava_1785 | argD | Ava_1785 | Ava_3730 | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.613 |
Ava_1785 | argG | Ava_1785 | Ava_2068 | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
Ava_1785 | purA | Ava_1785 | Ava_2053 | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
Ava_2127 | Ava_0636 | Ava_2127 | Ava_0636 | Aminotransferase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.818 |
Ava_2127 | Ava_1785 | Ava_2127 | Ava_1785 | Aminotransferase. | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | 0.900 |
Ava_2127 | argG | Ava_2127 | Ava_2068 | Aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.927 |
Ava_2127 | purA | Ava_2127 | Ava_2053 | Aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.910 |
argB | argD | Ava_0554 | Ava_3730 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.972 |
argB | argF | Ava_0554 | Ava_2197 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.967 |
argB | argG | Ava_0554 | Ava_2068 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.950 |
argB | argH | Ava_0554 | Ava_1807 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Argininosuccinate lyase. | 0.965 |
argB | carA | Ava_0554 | Ava_4410 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.797 |
argB | carB | Ava_0554 | Ava_1893 | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.680 |
argD | Ava_1785 | Ava_3730 | Ava_1785 | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. | 0.613 |
page 1 of 4