Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_1590 | Ava_1655 | Ava_1590 | Ava_1655 | Fructose-bisphosphate aldolase. | Transketolase. | 0.929 |
Ava_1590 | Ava_1694 | Ava_1590 | Ava_1694 | Fructose-bisphosphate aldolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.866 |
Ava_1590 | Ava_2492 | Ava_1590 | Ava_2492 | Fructose-bisphosphate aldolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.930 |
Ava_1590 | Ava_3697 | Ava_1590 | Ava_3697 | Fructose-bisphosphate aldolase. | Sedoheptulose 1,7-bisphosphatase / D-fructose 1,6-bisphosphatase; Catalyzes the hydrolysis of fructose 1,6-bisphosphate (Fru 1,6-P2) and sedoheptulose 1,7-bisphosphate (Sed 1,7-P2) to fructose 6- phosphate and sedoheptulose 7-phosphate, respectively; Belongs to the FBPase class 2 family. | 0.921 |
Ava_1590 | fbp | Ava_1590 | Ava_1680 | Fructose-bisphosphate aldolase. | D-fructose 1,6-bisphosphatase. | 0.928 |
Ava_1590 | pfkA | Ava_1590 | Ava_3044 | Fructose-bisphosphate aldolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.930 |
Ava_1590 | pgi | Ava_1590 | Ava_3708 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.847 |
Ava_1590 | tal | Ava_1590 | Ava_0493 | Fructose-bisphosphate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.930 |
Ava_1590 | tal-2 | Ava_1590 | Ava_1681 | Fructose-bisphosphate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.930 |
Ava_1655 | Ava_1590 | Ava_1655 | Ava_1590 | Transketolase. | Fructose-bisphosphate aldolase. | 0.929 |
Ava_1655 | Ava_1694 | Ava_1655 | Ava_1694 | Transketolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.914 |
Ava_1655 | Ava_2492 | Ava_1655 | Ava_2492 | Transketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.949 |
Ava_1655 | Ava_3697 | Ava_1655 | Ava_3697 | Transketolase. | Sedoheptulose 1,7-bisphosphatase / D-fructose 1,6-bisphosphatase; Catalyzes the hydrolysis of fructose 1,6-bisphosphate (Fru 1,6-P2) and sedoheptulose 1,7-bisphosphate (Sed 1,7-P2) to fructose 6- phosphate and sedoheptulose 7-phosphate, respectively; Belongs to the FBPase class 2 family. | 0.924 |
Ava_1655 | fbp | Ava_1655 | Ava_1680 | Transketolase. | D-fructose 1,6-bisphosphatase. | 0.947 |
Ava_1655 | guaA | Ava_1655 | Ava_1054 | Transketolase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.417 |
Ava_1655 | pfkA | Ava_1655 | Ava_3044 | Transketolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.924 |
Ava_1655 | pgi | Ava_1655 | Ava_3708 | Transketolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.968 |
Ava_1655 | tal | Ava_1655 | Ava_0493 | Transketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.983 |
Ava_1655 | tal-2 | Ava_1655 | Ava_1681 | Transketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.997 |
Ava_1694 | Ava_1590 | Ava_1694 | Ava_1590 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fructose-bisphosphate aldolase. | 0.866 |
page 1 of 5