Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_3111 | Ava_3836 | Ava_3111 | Ava_3836 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | 0.911 |
Ava_3111 | Ava_3996 | Ava_3111 | Ava_3996 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.903 |
Ava_3111 | Ava_4937 | Ava_3111 | Ava_4937 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Cytidine/deoxycytidylate deaminase, zinc-binding region. | 0.920 |
Ava_3111 | pyrB | Ava_3111 | Ava_1174 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.677 |
Ava_3111 | pyrE | Ava_3111 | Ava_0957 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.945 |
Ava_3111 | pyrF | Ava_3111 | Ava_0924 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.931 |
Ava_3111 | pyrH | Ava_3111 | Ava_0628 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.968 |
Ava_3111 | pyrR | Ava_3111 | Ava_3128 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.927 |
Ava_3111 | surE | Ava_3111 | Ava_2116 | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.911 |
Ava_3650 | pyrB | Ava_3650 | Ava_1174 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Ava_3650 | pyrE | Ava_3650 | Ava_0957 | Dihydroorotase. | Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.956 |
Ava_3650 | pyrF | Ava_3650 | Ava_0924 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.839 |
Ava_3650 | pyrR | Ava_3650 | Ava_3128 | Dihydroorotase. | Phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.955 |
Ava_3836 | Ava_3111 | Ava_3836 | Ava_3111 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. | 0.911 |
Ava_3836 | Ava_3996 | Ava_3836 | Ava_3996 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.912 |
Ava_3836 | pyrE | Ava_3836 | Ava_0957 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.935 |
Ava_3836 | pyrF | Ava_3836 | Ava_0924 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.914 |
Ava_3836 | pyrH | Ava_3836 | Ava_0628 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.918 |
Ava_3836 | pyrR | Ava_3836 | Ava_3128 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.916 |
Ava_3836 | surE | Ava_3836 | Ava_2116 | 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.923 |
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