Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0198 | Ava_2162 | Ava_0198 | Ava_2162 | Multi-sensor hybrid histidine kinase. | Cl- channel, voltage gated. | 0.520 |
Ava_0198 | crcB | Ava_0198 | Ava_3649 | Multi-sensor hybrid histidine kinase. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.410 |
Ava_2162 | Ava_0198 | Ava_2162 | Ava_0198 | Cl- channel, voltage gated. | Multi-sensor hybrid histidine kinase. | 0.520 |
Ava_2162 | crcB | Ava_2162 | Ava_3649 | Cl- channel, voltage gated. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.419 |
Ava_3650 | Ava_3651 | Ava_3650 | Ava_3651 | Dihydroorotase. | Phosphoglycerate/bisphosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.655 |
Ava_3650 | crcB | Ava_3650 | Ava_3649 | Dihydroorotase. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.754 |
Ava_3651 | Ava_3650 | Ava_3651 | Ava_3650 | Phosphoglycerate/bisphosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Dihydroorotase. | 0.655 |
Ava_3651 | crcB | Ava_3651 | Ava_3649 | Phosphoglycerate/bisphosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.622 |
crcB | Ava_0198 | Ava_3649 | Ava_0198 | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Multi-sensor hybrid histidine kinase. | 0.410 |
crcB | Ava_2162 | Ava_3649 | Ava_2162 | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Cl- channel, voltage gated. | 0.419 |
crcB | Ava_3650 | Ava_3649 | Ava_3650 | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Dihydroorotase. | 0.754 |
crcB | Ava_3651 | Ava_3649 | Ava_3651 | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Phosphoglycerate/bisphosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.622 |