Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ava_0119 | Ava_0462 | Patatin. | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | 0.646 |
Ava_0119 | Ava_2994 | Patatin. | Prolyl aminopeptidase, Serine peptidase, MEROPS family S33; Belongs to the peptidase S33 family. | 0.646 |
Ava_0119 | Ava_3990 | Patatin. | Thioesterase. | 0.641 |
Ava_0119 | Ava_4081 | Patatin. | Dienelactone hydrolase. | 0.647 |
Ava_0119 | Ava_4730 | Patatin. | Thioesterase. | 0.641 |
Ava_0462 | Ava_0119 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Patatin. | 0.646 |
Ava_0462 | Ava_1620 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Patatin. | 0.646 |
Ava_0462 | Ava_2994 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Prolyl aminopeptidase, Serine peptidase, MEROPS family S33; Belongs to the peptidase S33 family. | 0.661 |
Ava_0462 | Ava_3990 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Thioesterase. | 0.573 |
Ava_0462 | Ava_4081 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Dienelactone hydrolase. | 0.679 |
Ava_0462 | Ava_4730 | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | Thioesterase. | 0.573 |
Ava_1620 | Ava_0462 | Patatin. | Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A. | 0.646 |
Ava_1620 | Ava_2994 | Patatin. | Prolyl aminopeptidase, Serine peptidase, MEROPS family S33; Belongs to the peptidase S33 family. | 0.646 |
Ava_1620 | Ava_3990 | Patatin. | Thioesterase. | 0.641 |
Ava_1620 | Ava_4081 | Patatin. | Dienelactone hydrolase. | 0.647 |
Ava_1620 | Ava_4730 | Patatin. | Thioesterase. | 0.641 |
Ava_2056 | Ava_4081 | Conserved hypothetical protein. | Dienelactone hydrolase. | 0.502 |
Ava_2056 | Ava_4124 | Conserved hypothetical protein. | Phosphoribosyltransferase. | 0.654 |
Ava_2056 | Ava_4970 | Conserved hypothetical protein. | Phosphoribosyltransferase. | 0.654 |
Ava_2994 | Ava_0119 | Prolyl aminopeptidase, Serine peptidase, MEROPS family S33; Belongs to the peptidase S33 family. | Patatin. | 0.646 |
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