Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ava_0223 | Ava_0235 | Ava_0223 | Ava_0235 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.642 |
Ava_0223 | Ava_2219 | Ava_0223 | Ava_2219 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.596 |
Ava_0223 | Ava_3101 | Ava_0223 | Ava_3101 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
Ava_0223 | Ava_4718 | Ava_0223 | Ava_4718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.671 |
Ava_0235 | Ava_0223 | Ava_0235 | Ava_0223 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.642 |
Ava_0235 | Ava_2219 | Ava_0235 | Ava_2219 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.689 |
Ava_0235 | Ava_4718 | Ava_0235 | Ava_4718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.686 |
Ava_0823 | Ava_4718 | Ava_0823 | Ava_4718 | Cyclopropane-fatty-acyl-phospholipid synthase. | Conserved hypothetical protein. | 0.668 |
Ava_0823 | folD | Ava_0823 | Ava_2703 | Cyclopropane-fatty-acyl-phospholipid synthase. | Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.661 |
Ava_1742 | Ava_3101 | Ava_1742 | Ava_3101 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.746 |
Ava_1742 | Ava_4718 | Ava_1742 | Ava_4718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.692 |
Ava_1742 | Ava_4884 | Ava_1742 | Ava_4884 | Conserved hypothetical protein. | Site-specific recombinase (xisC)-like protein. | 0.626 |
Ava_2219 | Ava_0223 | Ava_2219 | Ava_0223 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.596 |
Ava_2219 | Ava_0235 | Ava_2219 | Ava_0235 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.689 |
Ava_2219 | Ava_4718 | Ava_2219 | Ava_4718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.686 |
Ava_2219 | Ava_4719 | Ava_2219 | Ava_4719 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.506 |
Ava_3101 | Ava_0223 | Ava_3101 | Ava_0223 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
Ava_3101 | Ava_1742 | Ava_3101 | Ava_1742 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.746 |
Ava_3101 | Ava_4718 | Ava_3101 | Ava_4718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.724 |
Ava_3101 | Ava_4884 | Ava_3101 | Ava_4884 | Conserved hypothetical protein. | Site-specific recombinase (xisC)-like protein. | 0.771 |
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