STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POMKProtein O-mannose kinase. (353 aa)    
Predicted Functional Partners:
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.921
FKTN
Fukutin.
     
 0.920
DAG1
Dystroglycan 1.
     
 0.762
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
    
 
 0.643
POMT1
Protein O-mannosyltransferase 1.
    
 
 0.580
POMT2
Protein O-mannosyltransferase 2.
    
 
 0.578
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.575
RXYLT1
Ribitol xylosyltransferase 1.
      
 0.571
FKRP
Fukutin related protein.
      
 0.564
FAM3C
Family with sequence similarity 3 member C.
    
 
 0.538
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.