STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCSecreted protein acidic and cysteine rich. (298 aa)    
Predicted Functional Partners:
DCN
Decorin.
   
  
 0.858
STAB2
Stabilin 2.
     
 0.684
STAB1
Stabilin 1.
     
 0.684
APOB
Apolipoprotein B.
   
 
  0.674
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.627
RAB34
RAB34, member RAS oncogene family.
   
    0.576
SPP1
Secreted phosphoprotein 1.
      
 0.573
ENSACOP00000010085
annotation not available
   
 
 0.561
POSTN
Periostin.
   
 
 0.561
COL6A2
Collagen type VI alpha 2 chain.
   
 
 0.547
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.