MGG_02867 protein (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MGG_02867

EMC1_C domain-containing protein. (974 aa)

Predicted Functional Partners:

MGG_07480

0.997

MGG_10831

0.995

MGG_04151

0.995

MGG_00520

0.983

MGG_07194

0.958

MGG_08559

0.949

MGG_00222

0.914

MGG_05640

0.911

MGG_03437

0.774

MGG_06444

0.556

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_00222	MGG_00520	G4NDL5	G4NBP5	Dynactin Arp1 p62 subunit RO2.	Uncharacterized protein.	0.870
MGG_00222	MGG_02867	G4NDL5	G4NLS3	Dynactin Arp1 p62 subunit RO2.	EMC1_C domain-containing protein.	0.914
MGG_00222	MGG_04151	G4NDL5	G4NIQ5	Dynactin Arp1 p62 subunit RO2.	ER membrane DUF1077 domain-containing protein.	0.870
MGG_00222	MGG_05640	G4NDL5	G4MNL2	Dynactin Arp1 p62 subunit RO2.	Uncharacterized protein.	0.846
MGG_00222	MGG_07480	G4NDL5	G4N1A1	Dynactin Arp1 p62 subunit RO2.	Tetratricopeptide repeat domain-containing protein.	0.866
MGG_00222	MGG_10831	G4NDL5	G4MYW5	Dynactin Arp1 p62 subunit RO2.	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	0.901
MGG_00520	MGG_00222	G4NBP5	G4NDL5	Uncharacterized protein.	Dynactin Arp1 p62 subunit RO2.	0.870
MGG_00520	MGG_02867	G4NBP5	G4NLS3	Uncharacterized protein.	EMC1_C domain-containing protein.	0.983
MGG_00520	MGG_04151	G4NBP5	G4NIQ5	Uncharacterized protein.	ER membrane DUF1077 domain-containing protein.	0.983
MGG_00520	MGG_05640	G4NBP5	G4MNL2	Uncharacterized protein.	Uncharacterized protein.	0.923
MGG_00520	MGG_07194	G4NBP5	G4MTN5	Uncharacterized protein.	DUF2012 domain-containing protein.	0.937
MGG_00520	MGG_07480	G4NBP5	G4N1A1	Uncharacterized protein.	Tetratricopeptide repeat domain-containing protein.	0.997
MGG_00520	MGG_08559	G4NBP5	G4N635	Uncharacterized protein.	Uncharacterized protein.	0.926
MGG_00520	MGG_10831	G4NBP5	G4MYW5	Uncharacterized protein.	ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.	0.989
MGG_02867	MGG_00222	G4NLS3	G4NDL5	EMC1_C domain-containing protein.	Dynactin Arp1 p62 subunit RO2.	0.914
MGG_02867	MGG_00520	G4NLS3	G4NBP5	EMC1_C domain-containing protein.	Uncharacterized protein.	0.983
MGG_02867	MGG_03437	G4NLS3	G4N8C9	EMC1_C domain-containing protein.	Uncharacterized protein.	0.774
MGG_02867	MGG_04151	G4NLS3	G4NIQ5	EMC1_C domain-containing protein.	ER membrane DUF1077 domain-containing protein.	0.995
MGG_02867	MGG_05640	G4NLS3	G4MNL2	EMC1_C domain-containing protein.	Uncharacterized protein.	0.911
MGG_02867	MGG_06444	G4NLS3	G4N794	EMC1_C domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.556