STRINGSTRING
PG_0011 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0011" - Glycosyl hydrolase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0011Glycosyl hydrolase (1003 aa)    
Predicted Functional Partners:
PG_2038
N-acetylmuramoyl-L-alanine amidase (132 aa)
       
  0.903
PG_0231
Hypothetical protein (432 aa)
          0.900
PG_1048
N-acetylmuramoyl-L-alanine amidase (396 aa)
     
  0.854
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate (274 aa)
 
     
  0.845
nahA
Beta-hexosaminidase (777 aa)
   
 
  0.840
PG_0076
N-acetylmuramoyl-L-alanine amidase (313 aa)
         
  0.831
PG_1393
Penicillin-binding protein 2 (621 aa)
   
 
  0.807
PG_0575
Penicillin-binding protein 2 (733 aa)
   
 
  0.807
PG_2192
M24/M37 family peptidase (337 aa)
       
  0.803
PG_0794
Penicillin-binding protein 1A (786 aa)
         
  0.801
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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