STRINGSTRING
PG_0020 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0020" - MarR family transcriptional regulator in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0020MarR family transcriptional regulator (234 aa)    
Predicted Functional Partners:
PG_0624
Hypothetical protein (168 aa)
   
          0.698
PG_0452
Hypothetical protein (715 aa)
   
          0.657
PG_0553
Extracellular protease (940 aa)
   
          0.650
PG_1427
Thiol protease/hemagglutinin PrtT (843 aa)
   
          0.630
PG_0320
Hypothetical protein (362 aa)
   
          0.628
PG_0569
Hypothetical protein (508 aa)
   
          0.618
PG_2041
Hypothetical protein (243 aa)
   
          0.614
PG_1035
Hypothetical protein (496 aa)
   
          0.607
PG_2227
Hypothetical protein (218 aa)
   
          0.602
ragB
Lipoprotein RagB (501 aa)
   
          0.602
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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