STRINGSTRING
PG_0027 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0027" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0027Hypothetical protein (391 aa)    
Predicted Functional Partners:
PG_0026
Hypothetical protein (1123 aa)
 
     
  0.961
ispF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (162 aa)
              0.887
porT
porT protein (244 aa)
   
     
  0.854
PG_0534
Hypothetical protein (827 aa)
   
     
  0.842
PG_1850
Hypothetical protein (302 aa)
   
     
  0.838
PG_1035
Hypothetical protein (496 aa)
   
     
  0.836
PG_0602
Hypothetical protein (346 aa)
 
          0.778
PG_2092
Hypothetical protein (419 aa)
   
          0.778
PG_1947
Hypothetical protein (1160 aa)
   
          0.778
PG_1058
OmpA family protein (672 aa)
   
          0.778
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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