STRINGSTRING
PG_0032 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0032" - Beta-mannosidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0032Beta-mannosidase (861 aa)    
Predicted Functional Partners:
nahA
Beta-hexosaminidase (777 aa)
 
   
  0.797
PG_0033
RmuC domain-containing protein (432 aa)
              0.756
PG_0031
Hypothetical protein (224 aa)
              0.697
PG_0902
Alpha-1,2-mannosidase (741 aa)
 
     
  0.604
PG_0011
Glycosyl hydrolase (1003 aa)
 
     
  0.578
PG_1884
alpha-L-fucosidase (674 aa)
 
        0.537
PG_0973
Alpha-1,2-mannosidase (771 aa)
 
     
  0.519
polA
DNA polymerase type I (926 aa)
   
   
  0.499
cutC
Copper homeostasis protein CutC; Involved in copper homeostasis (248 aa)
 
          0.494
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides (405 aa)
       
 
  0.482
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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