STRINGSTRING
trx protein (Porphyromonas gingivalis W83) - STRING interaction network
"trx" - Thioredoxin in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxThioredoxin (104 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase (313 aa)
 
  0.988
PG_0618
Alkyl hydroperoxide reductase (188 aa)
   
  0.983
msrA
Peptide methionine sulfoxide reductase (352 aa)
   
  0.967
pdhD
Alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase (449 aa)
   
  0.951
nrd
Ribonucleotide reductase (850 aa)
   
  0.916
PG_1704
Thiol-disulfide interchange protein dsbD (682 aa)
   
 
  0.854
groL
Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
   
 
  0.826
dnaK
dnaK protein; Acts as a chaperone (640 aa)
 
  0.819
dnaE
DNA polymerase III subunit alpha (1228 aa)
         
  0.817
bcp
Bacterioferritin comigratory protein (167 aa)
   
 
  0.803
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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