STRINGSTRING
nahA protein (Porphyromonas gingivalis W83) - STRING interaction network
"nahA" - Beta-hexosaminidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nahABeta-hexosaminidase (777 aa)    
Predicted Functional Partners:
PG_1048
N-acetylmuramoyl-L-alanine amidase (396 aa)
       
  0.981
PG_0076
N-acetylmuramoyl-L-alanine amidase (313 aa)
         
  0.980
PG_2038
N-acetylmuramoyl-L-alanine amidase (132 aa)
         
  0.979
PG_0011
Glycosyl hydrolase (1003 aa)
   
 
  0.840
PG_0032
Beta-mannosidase (861 aa)
 
   
  0.797
PG_0139
Lytic murein transglycosylase D (451 aa)
         
  0.786
PG_0973
Alpha-1,2-mannosidase (771 aa)
     
  0.712
PG_1712
Alpha-1,2-mannosidase (781 aa)
     
  0.707
PG_0902
Alpha-1,2-mannosidase (741 aa)
     
  0.686
cutC
Copper homeostasis protein CutC; Involved in copper homeostasis (248 aa)
 
          0.643
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (6%) [HD]