STRINGSTRING
PG_0055 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0055" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0055Hypothetical protein (351 aa)    
Predicted Functional Partners:
recJ
single-stranded-DNA-specific exonuclease RecJ (584 aa)
              0.859
PG_1005
Putative lipoprotein (246 aa)
 
          0.769
PG_0336
Hypothetical protein (189 aa)
   
          0.765
PG_2094
Hypothetical protein (1515 aa)
   
          0.764
PG_2031
Hypothetical protein (150 aa)
   
          0.764
PG_1050
Hypothetical protein (298 aa)
   
          0.741
PG_1651
Hypothetical protein (995 aa)
   
          0.736
PG_0413
Hypothetical protein (114 aa)
   
          0.728
PG_0411
Hemagglutinin (925 aa)
   
          0.726
PG_1372
Hypothetical protein (473 aa)
   
          0.721
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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