STRINGSTRING
PG_0078 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_0078" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0078Hypothetical protein (232 aa)    
Predicted Functional Partners:
PG_0079
Abortive infection protein (433 aa)
 
          0.974
PG_0080
Hypothetical protein (87 aa)
              0.752
PG_0081
Hypothetical protein (725 aa)
              0.583
PG_0076
N-acetylmuramoyl-L-alanine amidase (313 aa)
              0.477
PG_0075
Phosphoribosylformylglycinamidine cyclo-ligase (413 aa)
              0.477
PG_0083
Hypothetical protein (261 aa)
              0.461
PG_0082
Hypothetical protein (300 aa)
              0.461
PG_1005
Putative lipoprotein (246 aa)
   
          0.449
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (361 aa)
              0.438
PG_1466
Hypothetical protein (190 aa)
   
          0.419
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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